NCBI Blast databases를 다운로드 할 수 있는 곳. → http://www.ncbi.nlm.nih.gov/BLAST/download.shtml
NCBI database 설명서 → readme.html
NCBI에서 database 다운 받는 방법
NCBI taxonomy browser site
EBML-EBI web site / fasta database ftp
Basic Regular Expression(BRE) syntax reference , 한국어 설명
IPI database download → http://www.ebi.ac.uk/IPI/IPIhelp.html
GI Cross-Reference file format → http://www.ebi.ac.uk/IPI/Gi2IpiFormat.html
A SEquence Globally Unique IDentifier (SEGUID) Proteome Database
| Description | |||
| Expasy | main site | link | |
| Uniprot knowledgebase | search | link | text, sequence blast search 가능 |
| NCBI protein | search | link | protein description text search 가능 |
| NCBI protein | Blast search | link | protein blast search 가능 |
| IPI | search | link | database identifier or protein name search 가능 |
| Uniprot | home | link | Uniprot(swissprot+TrEMBL+) 홈페이지 |
| Server configuration : | |
| IQReport.log : | |
| CmSetup.log : |
| Setting 값 설명 : | |
| Setting file : | |
| plate 위치 변화 계산 |
<GO annotator>
ReBIL Project : Web-based GO annotator tool freely! click here
CPAS : Local-operated tool. click here
; about protein annotation
BiNGO
http://www.geneontology.org/
http://www.ebi.ac.uk/GOA/
http://www.ebi.ac.uk/ego/
GO slim
GO perl
GOminder
WEGO
GO slim structure
Integr8 : Access to complete genomes and proteomes
<프로테오믹스 관련 실험실 >
http://proteomics.kist.re.kr
한국기초과학지원연구원
연세프로테옴 센터